statgenHTP: High Throughput Phenotyping (HTP) Data Analysis
Phenotypic analysis of data coming from high throughput phenotyping (HTP) platforms, including different types of outlier detection, spatial analysis, and parameter estimation. The package is being developed within the EPPN2020 project (<https://eppn2020.plant-phenotyping.eu/>). Some functions have been created to be used in conjunction with the R package 'asreml' for the 'ASReml' software, which can be obtained upon purchase from 'VSN' international (<https://vsni.co.uk/software/asreml-r/>).
| Version: | 1.0.7 |
| Depends: | R (≥ 3.6) |
| Imports: | animation, factoextra, ggforce, ggplot2 (≥ 3.3.0), ggnewscale, grid, gridExtra, Matrix, methods, LMMsolver, locfit, lubridate, rlang, reshape2, scales, spam, SpATS (≥ 1.0-13) |
| Suggests: | asreml (≥ 4.0), knitr, rmarkdown, tinytest (≥ 1.2.4) |
| Published: | 2024-10-14 |
| DOI: | 10.32614/CRAN.package.statgenHTP |
| Author: | Emilie J Millet 
[aut],
Maria Xose Rodriguez Alvarez
[aut],
Diana Marcela Perez Valencia
[aut],
Isabelle Sanchez [aut],
Nadine Hilgert [aut],
Bart-Jan van Rossum
[aut, cre],
Fred van Eeuwijk
[aut],
Martin Boer [aut] |
| Maintainer: | Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl> |
| BugReports: | https://github.com/Biometris/statgenHTP/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL] |
| URL: | https://biometris.github.io/statgenHTP/index.html, https://github.com/Biometris/statgenHTP/ |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| In views: | Agriculture |
| CRAN checks: | statgenHTP results |
Documentation:
| Reference manual: | statgenHTP.pdf |
| Vignettes: |
Overview (source, R code) |
Downloads:
| Package source: | statgenHTP_1.0.7.tar.gz |
| Windows binaries: | r-devel: statgenHTP_1.0.7.zip, r-release: statgenHTP_1.0.7.zip, r-oldrel: statgenHTP_1.0.7.zip |
| macOS binaries: | r-devel (arm64): statgenHTP_1.0.7.tgz, r-release (arm64): statgenHTP_1.0.7.tgz, r-oldrel (arm64): statgenHTP_1.0.7.tgz, r-devel (x86_64): statgenHTP_1.0.7.tgz, r-release (x86_64): statgenHTP_1.0.7.tgz, r-oldrel (x86_64): statgenHTP_1.0.7.tgz |
| Old sources: | statgenHTP archive |
Linking:
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