Tools and 'ggplot2' Extensions for Infectious Disease Surveillance and Outbreak Investigation


[Up] [Top]

Documentation for package ‘ggsurveillance’ version 0.1.1

Help Pages

align_and_bin_dates_seasonal Align dates for seasonal comparison
align_dates_seasonal Align dates for seasonal comparison
create_agegroups Create Age Groups from Numeric Values
expand_counts Duplicate rows according to a weighting variable
geometric_mean Compute a Geometric Mean
geom_epicurve Create an epidemic curve plot or used date binning of observations
geom_epigantt Epi Gantt Chart: Visualize Epidemiological Time Intervals
geom_hline_year Automatically create lines at the turn of every year
geom_vline_year Automatically create lines at the turn of every year
influenza_germany Germany Influenza (FLU) Surveillance data
scale_x_cases_5er Continuous x-axis and y-axis scale for (case) counts
scale_y_cases_5er Continuous x-axis and y-axis scale for (case) counts
StatBinDate Create an epidemic curve plot or used date binning of observations
StatDateCount Create an epidemic curve plot or used date binning of observations
StatEpicurve Create an epidemic curve plot or used date binning of observations
stat_bin_date Create an epidemic curve plot or used date binning of observations
stat_date_count Create an epidemic curve plot or used date binning of observations
uncount Duplicate rows according to a weighting variable